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We’re starting to understand how viruses trigger chronic conditions

Widespread cases of long covid have shone a spotlight on the role viral infections play in previously neglected conditions like chronic fatigue syndrome and fibromyalgia
A protest outside the White House, Washington DC, in September 2022 urging government action for people with myalgic encephalomyelitis, long covid and other infection-associated chronic conditions
A protest outside the White House, Washington D.C., in September 2022 urging government action for people with myalgic encephalomyelitis, long covid and other infection-associated chronic conditions
Bryan Olin Dozier/NurPhoto/Shutterstock

Millions of people worldwide may have experienced long covid, with some having symptoms that have lingered for several years. However, while the number of cases is exceptional, the syndrome itself is not.

Long covid is one of many chronic conditions that can be triggered, at least in part, by infections, mostly by viruses. A surge of interest in long covid has helped us gain an improved understanding of what causes some of these conditions, from the role of herpes viruses in myalgic encephalomyelitis or chronic fatigue syndrome (ME/CFS) to different viruses’ potential effects in the onset of fibromyalgia, a condition that causes chronic pain throughout the body as well as other symptoms, like fatigue.

The scale of the long covid pandemic is staggering. A recent analysis of multiple studies, led by at the Patient-Led Research Collaborative in New York, offered a “conservative” estimate that caused by the SARS-CoV-2 coronavirus result in long covid. Given there have been , this implies at least 75 million incidences of long covid.

Possible causes of long covid

Long covid causes a wide range of symptoms, including brain fog, shortness of breath and post-exertional malaise. Exactly why it occurs is unknown, but there are multiple potential causes. Many people with long covid have ongoing disruption to their immune system, whether it be overactive or suppressed, which may contribute to the symptoms. Microscopic blood clots have been seen in some people, which may block and damage the smallest blood vessels, potentially explaining their fatigue. And some people may have persistent coronavirus infections that remain in the body.

This array of potential causes may mean there are several kinds of long covid – including post-intensive care and post-viral fatigue syndromes – each involving different mechanisms and combinations of symptoms. But long covid itself didn’t come as a surprise. “I think it was quite reasonable to expect SARS-CoV-2 to cause chronic problems,” says at Brunel University London. That is because other coronaviruses, such as those that cause severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS), have triggered long-term problems.

Nevertheless, long covid has drawn researchers’ attention to other conditions that can commonly occur after a viral infection, some of which have been neglected for decades.

Viral triggers for ME/CFS

One condition that was garnering increased scientific attention before the covid-19 pandemic is ME/CFS – and long covid has raised its profile further. The most common include near-constant tiredness, even after sleep, and taking a long time to recover following exercise. This has considerable overlap with long covid: a study published in 2022 of 465 people with long covid found that met the criteria for ME/CFS.

“If you ask any ME/CFS patient, they always say it started with flu-like or cold-like symptoms”

Some have long suspected that ME/CFS is triggered by a viral infection, but pinning down the culprit has been hard, says at the University of Würzburg, Germany. “If you ask any patient, they always say it started with flu-like or cold-like symptoms,” he says. But by the time ME/CFS has developed and doctors are investigating, there is no trace of the original virus.

Prusty thinks ME/CFS originates in early childhood, when most people are infected by human betaherpesvirus 6B (HHV-6B), which causes a mild illness lasting a few days. “Afterwards, the virus stays in our body for the rest of our lives,” says Prusty. Later in life, the virus can become reactivated – and it is this that Prusty and some others believe causes ME/CFS.

In a 2021 study, Cliff and her colleagues took monthly saliva samples from 30 people with ME/CFS and 14 people who didn’t have the condition. Those with ME/CFS had higher levels of HHV-6B and another herpes virus, HHV-7, than those without. In people whose symptoms fluctuated over time, more severe symptoms were .

In 2022, Prusty and his colleagues from three people who had been diagnosed with ME/CFS, plus three who hadn’t. They only found signs of HHV-6B activity in the brain and spinal cord of those who’d had ME/CFS.

“The virus doesn’t have to be completely active [and] doesn’t have to produce viral particles,” says Prusty, who describes what the team saw as localised infections. This limited viral activity seems to be enough to cause chronic symptoms.

Prusty thinks reactivated herpes viruses may also be a factor in long covid, specifically in cases where symptoms last beyond three months or even for years. In line with this, in 2022, Eirini Apostolou at Linköping University, Sweden, and her colleagues showed that people EBV, HHV6 and HERV-K in their saliva three to six months after becoming infected with SARS-CoV-2, suggesting that the herpes viruses were reactivated after they caught the coronavirus. This was particularly true for those who also had ME/CFS.

Fibromyalgia’s multiple triggers

Just as long covid and ME/CFS overlap, so do ME/CFS and fibromyalgia. In 2022, at the National Institute of Cardiology Mexico in Mexico City and his colleagues showed that .

Unlike ME/CFS, where viruses may be responsible, in fibromyalgia they could be one of multiple causes. “Infection induces fibromyalgia in a subgroup of fibromyalgia patients,” says Martínez-Lavín. “Psychological stress, physical trauma and autoimmune illnesses are other recognised triggers.”

But a picture is forming of how viruses may give rise to the condition. Martínez-Lavín thinks the key to fibromyalgia lies in the dorsal root ganglia, a set of 31 nerve clusters dotted along the spine. Many pathogens are able to infect them, including herpes viruses, the hepatitis C virus and SARS-CoV-2.

When the neurons’ normal function is disrupted, Martínez-Lavín thinks they may send erroneous signals to the brain, causing the sensation of pain where no tissue damage exists. Studies have found correlations between , and a small study in 2022 suggested that antiviral drugs targeting chronic hepatitis C in some people.

Rethinking chronic conditions

While the mechanisms of conditions like long covid, ME/CFS and fibromyalgia are becoming clearer, many questions remain unanswered. We don’t know why certain viral infections are more likely to cause chronic conditions than others or what makes some people more susceptible to developing these conditions.

A long-standing challenge has been the lack of diagnostic tests that can reliably distinguish people who have chronic fatigue and pain conditions from people who don’t by measuring a particular molecule in a person’s blood or a similar bodily substance.

In the longer term, digging into the physiological mechanisms of these conditions should suggest the best treatment options. In the meantime, Cliff says sociological change is the most important preventative step we can take.

“I think personally there needs to be a bit of a groundswell change in the way we view illness,” she says. “There is evidence that overexertion early on after an acute infection is more likely to lead to chronic ill health than recovery.” In other words, when we are ill we should take time to rest rather than rushing back to work or school while still unwell. “I don’t think that enables us to get better,” says Cliff.

Article amended on 1 March 2023

This article has been changed to correctly define ME.

Topics: chronic fatigue syndrome / long covid / Viruses